BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039H09SP1|AL430773
(953 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig478 1399 0.0
>3x_Contig478
Length = 3300
Score = 1399 bits (705), Expect = 0.0
Identities = 713/715 (99%), Gaps = 1/715 (0%)
Strand = Plus / Plus
Query: 1 atcatcgttcttcaaataattggaagaataattcttttggttgatgactgacaccggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2587 atcatcgttcttcaaataattggaagaataattcttttggttgatgactgacaccggttt 2646
Query: 61 caaagtaattggttgagcaatatgttcattttcttgtctttcgataccgataatctttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2647 caaagtaattggttgagcaatatgttcattttcttgtctttcgataccgataatctttaa 2706
Query: 121 ctttttggcgaactcttcagctgctttaattcttcctagacgacgtttctcaagcaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 ctttttggcgaactcttcagctgctttaattcttcctagacgacgtttctcaagcaaatg 2766
Query: 181 ctgtgggaccttcttcgatggtatatcctttgagatcttcccatcggaccccagcagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2767 ctgtgggaccttcttcgatggtatatcctttgagatcttcccatcggaccccagcagagg 2826
Query: 241 ttccttagaaggctccttagaaggttctttagagggcgattcggtgggatctatttcggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2827 ttccttagaaggctccttagaaggttctttagagggcgattcggtgggatctatttcggt 2886
Query: 301 gtccattggggattggcttgtcagagatggaggttgctggttcaactgcaagctataatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 gtccattggggattggcttgtcagagatggaggttgctggttcaactgcaagctataatt 2946
Query: 361 ggaatgagtttacattattgtgcgttactatatggctggctatatgataaacataaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2947 ggaatgagtttacattattgtgcgttactatatggctggctatatgataaacataaagtt 3006
Query: 421 gtwatgatgtagatgttcacgttagagcacggtagggtaatcactagatgctggaagatt 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 gtaatgatgtagatgttcacgttagagcacggtagggtaatcactagatgctggaagatt 3066
Query: 481 actatgtgtattacccggcgtagacagggtaataaacactcataaaacatcttctaattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3067 actatgtgtattacccggcgtagacagggtaataaacactcataaaacatcttctaattg 3126
Query: 541 ttattaccctgtctaatccgggtaatgataacacacgattaaatccgaaggctttttccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3127 ttattaccctgtctaatccgggtaatgataacacacgattaaatccgaaggctttttccc 3186
Query: 601 caggtcaattgtttcacccgctccgccacagatacgagtttcttataccccagacgctta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3187 caggtcaattgtttcacccgctccgccacagatacgagtttcttataccccagacgctta 3246
Query: 661 ccctacctctaccccattggaccgtttcccaatcaggtaaaaaaacagaaaccaa 715
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3247 ccctacctctaccccattggaccgtttcccaatcaggt-aaaaaacagaaaccaa 3300
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6724
Number of Sequences: 1807
Number of extensions: 6724
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)